Hey, i've been running for six years now and around 5 miles every day, but in the past few months i've been getting the same pains. The answer could be with the way in which you run, you may be putting more weight on the inside of your feet when you run, placing more stress on the arch and inner calf. When you run next time, focus on how your feet land on the ground...it could just be that you're placing too much weight on the inside of your feet instead of the outside anhd ball of your feet. This helped with me, but you will most likely have to do some work on your calves just to help them recover and strengthen.
One way of finding out right now if you are NOT running properly is to look at the soles of your running trainers, if the tread and grooves are worn more on the inside of your step then an old injury may have had a slight impact on your running. The outside step SHOULD be worn, not the inside.
Hope this helps, you might feel the difference straight away but don't get over excited and start running marathons, take your time and work on your calves, gentle stretches etc. This was suggested to me by a friend who is a sports/fitness coach, and i can't thank him enough!